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Chapter 11

Immunology

Book Version 6
By Boundless
Boundless Microbiology
Microbiology
by Boundless
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Section 1
Overview of Immunity
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Cells and Organs of the Immune System

The immune system includes primary lymphoid organs, secondary lymphatic tissues and various cells in the innate and adaptive immune systems.

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Overview of Human-Microbial Reactions

Human-microbial interactions can be commensal or mutualistic, as with many types of gut flora, or harmful, as with pathogenic bacteria.

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Overview of the Immune System

The immune system is a system of biological structures and processes within an organism that protects against disease.

Section 2
The Innate Immune Response
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Natural Killer Cells

Natural killer cells are part of the innate immune response that recognize abnormal MHC I molecules on infected/tumor cells and kill them.

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Physical and Chemical Barriers

The innate immune response has physical and chemical barriers that exist as the first line of defense against infectious pathogens.

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The Complement System

Around 20 soluble proteins comprise the complement system, which helps destroy extracellular microorganisms that have invaded the body.

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Pathogen Recognition

Upon pathogen entry to the body, the innate immune system uses several mechanisms to destroy the pathogen and any cells it has infected.

Section 3
Phagocytes
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Phagocyte Migration and Phagocytosis

Phagocytosis is the engulfment of foreign material in a body by a specialized cell type.

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Antigen-presenting Cells: B and T cells

B and T cells, parts of the adaptive immune response, contain receptors that can identify antigens derived from pathogens.

Section 4
Innate Defenders
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The Complement System

The complement system helps or "complements" the ability of antibodies and phagocytic cells to clear pathogens from an organism.

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Interferons

Interferons (IFNs) are proteins made and released by host cells in response to the presence of pathogens.

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Natural Killer Cells

Natural killer cells (or NK cells) are a type of cytotoxic lymphocyte critical to the innate immune system.

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Toll-Like Receptors

Toll-like receptors (TLRs) are a class of proteins that play a key role in the innate immune system as well as the digestive system.

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Iron-Binding Proteins

Iron binding proteins of the innate immune system include lactoferrin and transferrins.

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Antimicrobial Peptides

Antimicrobial peptides are an evolutionarily conserved component of the innate immune response and are found among all classes of life.

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The Complement System and Heart Disease

In autoimmune heart diseases, the body's immune defense system mistakes its own cardiac antigens as foreign, and attacks them.

Section 5
The Adaptive Immune Response
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Humoral Immune Response

The humoral immune response defends against pathogens that are free in the blood by using antibodies against pathogen-specific antigens.

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Development of the Dual Lymphocyte System

Lymphocytes originate from a common progenitor in a process known as hematopoeisis.

Section 6
Antigens and Antibodies
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Immunodeficiency

Immunodeficiency occurs when the immune system cannot appropriately respond to infections.

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Antibody Functions

Antibodies, part of the humoral immune response, are involved in pathogen detection and neutralization.

Section 7
Antibodies
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Antibody Proteins and Antigen Binding

A region at the tip of the antibody protein is very variable, allowing millions of antibodies with different antigen-binding sites to exist.

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Antibody Genes and Diversity

Complex genetic mechanisms evolved which allow vertebrate B cells to generate a diverse pool of antibodies from relatively few antibody genes.

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Clonal Selection of Antibody-Producing Cells

The clonal selection hypothesis is a widely accepted model for the immune system's response to infection.

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Isotype Class Switching

Isotype class switching is a biological mechanism that changes a B cell's production of antibody from one class to another.

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Making Memory B Cells

Memory B cells are a B cell sub-type that are formed following primary infection.

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Primary and Secondary Antibody Responses

The immune system protects organisms from infection first with the innate immune system, then with adaptive immunity.

Section 8
T Cells and Cellular Immunity
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Cytotoxic T Lymphocytes and Mucosal Surfaces

The lymphatic system houses large populations of immune cells which are released upon detection of a pathogen.

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Classes of T Cells

T cells play a central role in cell-mediated immune response through the use of the surface T cell receptor to recognize peptide antigens.

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Cell-Mediated Immunity

Cell-mediated immunity involves cytotoxic T cells recognizing infected cells and bringing about their destruction.

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Regulatory T Cells

Regulatory T cells are a subset of T cells which modulate the immune system and keep immune reactions in check.

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T Cell Receptors

The T Cell Receptor (TCR) found on the surface of T cells is responsible for recognizing antigens.

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Adaptive Immunity and the Immunoglobulin Superfamily

Adaptive immunity is stimulated by exposure to infectious agents and recruits elements of the immunoglobulin superfamily.

Section 9
Antigen-Presenting Cells
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Dendritic Cells

Dendritic cells are immune cells that function to process antigens and present them to T cells.

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Macrophages

Phagocytosis is a front-line defense against pathogen attack requiring the concerted action of macrophages.

Section 10
Immunity and Molecular Signals
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Clonal Selection and Tolerance

Clonal selection and tolerance select for survival of lymphocytes that will protect the host from foreign antigens.

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Cytokines and Chemokines

Cytokines and chemokines are both small proteins secreted by cells of the immune system.

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Superantigens

Superantigens are a class of antigens that cause activation of T-cells and massive cytokine release.

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The Complement System

The complement system helps antibodies and phagocytic cells clear pathogens from an organism.

Section 11
The Major Histocompatibility Complex (MHC)
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MHC Polymorphism and Antigen Binding

MHC molecules display a molecular fraction called an epitope and mediate interactions of leukocytes with other leukocytes or body cells.

Section 12
Classifying Immunities
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Natural Active Immunity

Naturally acquired active immunity occurs when a person is exposed to a live pathogen, develops the disease, and then develops immunity.

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Natural Passive Immunity

Naturally acquired passive immunity occurs during pregnancy, when antibodies are passed from the maternal blood into the fetal bloodstream.

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Artificial Immunity

Artificial immunity is a mean by which the body is given immunity to a disease by intentional exposure to small quantities of it.

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Immunology
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Immunology Applications
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